Diagnostics#
Diagnostics report compiled at: 2026-08-13 03:27:50.337876
Databook Version Info#
Remote : https://github.com/AllenSWDB/allenswdb.github.io.git
Branch : main
Commit Hash: b2fa96a6a635e6991632626a0472bd3c8f8d5c11
Executable Pages#
These pages contain executable Python code. Any failures will be listed here with an ❌. Hover over the failure icon to see what kind of error occurred.
Document |
Modified |
Method |
Run Time (s) |
Status |
|---|---|---|---|---|
2026-08-13 03:16 |
cache |
14.06 |
✅ |
|
2026-08-13 03:20 |
cache |
241.3 |
✅ |
|
2026-08-13 03:20 |
cache |
6.65 |
✅ |
|
2026-08-13 03:21 |
cache |
20.48 |
✅ |
|
2026-08-13 03:21 |
cache |
13.83 |
✅ |
|
2026-08-13 03:21 |
cache |
8.59 |
✅ |
|
2026-08-13 03:21 |
cache |
12.05 |
✅ |
|
2026-08-13 03:21 |
cache |
2.08 |
✅ |
|
2026-08-13 03:21 |
cache |
3.21 |
✅ |
|
2026-08-13 03:24 |
cache |
152.33 |
✅ |
|
2026-08-13 03:27 |
cache |
192.83 |
✅ |
|
2026-08-13 03:27 |
cache |
16.89 |
✅ |
|
2026-08-13 03:27 |
cache |
2.93 |
✅ |
|
physiology/ephys/cell-type-lookup-table/ctlut-accessing-data |
2026-08-14 18:58 |
cache |
65.62 |
❌ |
physiology/ephys/cell-type-lookup-table/ctlut-identifying-tagged-units |
2026-08-14 18:58 |
cache |
6.68 |
❌ |
2026-08-13 03:28 |
cache |
0.81 |
✅ |
|
physiology/ephys/np-ultra/npultra-psychedelics-accessing-data |
2026-08-14 18:58 |
cache |
2.3 |
❌ |
2026-08-13 03:32 |
cache |
13.27 |
✅ |
|
2026-08-13 04:04 |
cache |
209.71 |
✅ |
|
physiology/ephys/visual-behavior/VBN-Tutorial-Aligning_Behavior_Data_to_Task_Events |
2026-08-13 04:06 |
cache |
111.42 |
✅ |
physiology/ephys/visual-behavior/VBN-Tutorial-Aligning_Neural_Data_to_Stimuli |
2026-08-13 04:08 |
cache |
125.08 |
✅ |
physiology/ephys/visual-behavior/VBN-Tutorial-Analyzing_LFP_Data |
2026-08-13 04:12 |
cache |
193.23 |
✅ |
2026-08-13 04:12 |
cache |
0.96 |
✅ |
|
2026-08-13 04:17 |
cache |
273.69 |
✅ |
|
2026-08-13 04:21 |
cache |
251.98 |
✅ |
|
2026-08-13 04:12 |
cache |
0.96 |
✅ |
|
2026-08-13 04:27 |
cache |
385.23 |
✅ |
|
2026-08-13 04:28 |
cache |
18.42 |
✅ |
|
2026-08-13 04:31 |
cache |
177.86 |
✅ |
|
2026-08-13 04:33 |
cache |
148.4 |
✅ |
|
2026-08-13 04:37 |
cache |
236.59 |
✅ |
|
2026-08-13 04:37 |
cache |
0.75 |
✅ |
|
2026-08-13 04:41 |
cache |
227.86 |
✅ |
|
2026-08-14 16:46 |
cache |
30.86 |
✅ |
|
2026-08-14 16:46 |
cache |
10.44 |
✅ |
|
2026-08-14 18:59 |
cache |
29.65 |
❌ |
|
2026-08-13 03:28 |
cache |
0.81 |
✅ |
|
2026-08-13 04:59 |
cache |
550.32 |
✅ |
|
2026-08-13 04:59 |
cache |
7.54 |
✅ |
|
2026-08-13 05:00 |
cache |
45.49 |
✅ |
|
physiology/ophys/visual-behavior/VBO-Tutorial-Compare_trial_types |
2026-08-13 05:01 |
cache |
53.94 |
✅ |
physiology/ophys/visual-behavior/VBO-Tutorial-Downloading_data_and_exploring_the_manifest |
2026-08-13 05:01 |
cache |
21.76 |
✅ |
2026-08-13 16:22 |
cache |
528.54 |
✅ |
|
2026-08-13 16:23 |
cache |
32.01 |
✅ |
|
2026-08-13 16:23 |
cache |
13.13 |
✅ |
|
2026-08-13 16:23 |
cache |
11.64 |
✅ |
|
2026-08-13 16:24 |
cache |
19.95 |
✅ |
|
2026-08-13 16:24 |
cache |
10.54 |
✅ |
|
2026-08-13 16:24 |
cache |
17.61 |
✅ |
|
2026-08-14 18:59 |
cache |
8.06 |
❌ |
Environment#
Python Version#
3.10.12 | packaged by conda-forge | (main, Jun 23 2023, 22:40:32) [GCC 12.3.0]
Environments#
/opt/envs/allensdk
aiohttp==3.9.5
aiosignal==1.3.1
allensdk==2.16.2
argschema==3.0.4
asttokens==2.4.1
async-timeout==4.0.3
atomicwrites==1.4.1
attrs==23.2.0
blosc==1.11.2
blosc2==2.7.0
boto3==1.34.149
botocore==1.34.149
Brotli==1.1.0
cachetools==5.4.0
caveclient==7.11.0
certifi==2024.7.4
chardet==5.2.0
charset-normalizer==3.3.2
click==8.1.7
cloud-files==4.26.0
cloud-volume==10.1.0
comm==0.2.2
compressed_segmentation==2.3.1
contourpy==1.2.1
crc32c==2.4.1
cycler==0.12.1
dataclasses==0.6
debugpy==1.8.2
decorator==5.1.1
deflate==0.7.0
dill==0.3.8
distro==1.9.0
DracoPy==1.4.0
exceptiongroup==1.2.2
executing==2.0.1
fasteners==0.19
fastremap==1.15.0
fonttools==4.53.1
frozenlist==1.4.1
future==1.0.0
gevent==24.2.1
Glymur==0.13.4
google-api-core==2.19.1
google-apitools==0.5.32
google-auth==2.32.0
google-cloud-core==2.4.1
google-cloud-storage==2.18.0
google-crc32c==1.5.0
google-resumable-media==2.7.1
googleapis-common-protos==1.63.2
greenlet==3.0.3
h5py==3.11.0
hdmf==3.14.2
httplib2==0.22.0
idna==3.7
imageio==2.34.2
imageryclient==1.0.4
inflection==0.5.1
iniconfig==2.0.0
ipykernel==6.29.5
ipython==8.26.0
jedi==0.19.1
Jinja2==3.1.4
jmespath==1.0.1
joblib==1.4.2
json5==0.9.25
jsonschema==4.23.0
jsonschema-specifications==2023.12.1
jupyter_client==8.6.2
jupyter_core==5.7.2
kiwisolver==1.4.5
lazy_loader==0.4
lxml==5.2.2
Markdown==3.6
MarkupSafe==2.1.5
marshmallow==3.21.3
matplotlib==3.9.1
matplotlib-inline==0.1.7
meshparty==1.18.3
microviewer==1.7.1
msgpack==1.0.8
multidict==6.0.5
multiprocess==0.70.16
multiwrapper==0.1.1
ndindex==1.8
ndx-events==0.2.0
nest-asyncio==1.6.0
networkx==2.8.8
neuroglancer==2.40.1
nglui==3.3.5
nptyping==2.5.0
numexpr==2.10.1
numpy==1.23.5
oauth2client==4.1.3
orjson==3.10.6
packaging==24.1
pandas==1.5.3
parso==0.8.4
pathos==0.3.2
patsy==0.5.6
pexpect==4.9.0
pillow==10.4.0
platformdirs==4.2.2
pluggy==1.5.0
plyfile==1.0.3
pooch==1.8.2
posix-ipc==1.1.1
pox==0.3.4
ppft==1.7.6.8
prompt_toolkit==3.0.47
propcache==0.3.2
proto-plus==1.24.0
protobuf==5.27.2
psutil==6.0.0
psycopg2-binary==2.9.9
ptyprocess==0.7.0
pure_eval==0.2.3
py-cpuinfo==9.0.0
pyarrow==17.0.0
pyasn1==0.6.0
pyasn1_modules==0.4.0
Pygments==2.18.0
pymeshfix==0.17.0
pynrrd==1.0.0
pynwb==2.8.1
pyparsing==3.2.3
pysimdjson==7.0.2
pytest==8.4.1
python-dateutil==2.9.0.post0
python-jsonschema-objects==0.5.7
pytz==2025.2
pyvista==0.46.3
PyYAML==6.0.2
pyzmq==27.0.2
referencing==0.36.2
requests==2.32.5
requests-toolbelt==1.0.0
rpds-py==0.27.1
rsa==4.9.1
rtree==1.4.1
ruamel.yaml==0.18.15
ruamel.yaml.clib==0.2.12
s3transfer==0.10.4
scikit-build==0.18.1
scikit-image==0.24.0
scikit-learn==1.5.1
scipy==1.10.1
scooby==0.10.1
seaborn==0.13.2
semver==3.0.4
shapely==2.1.1
simpleitk==2.5.2
simplejpeg==1.8.2
simplejson==3.20.1
six==1.17.0
skeleton_plot==0.1.0
SQLAlchemy==2.0.43
stack-data==0.6.3
standard-transform==1.4.0
statsmodels==0.14.5
tables==3.10.1
tenacity==9.1.2
threadpoolctl==3.6.0
tifffile==2025.5.10
tomli==2.2.1
tornado==6.5.2
tqdm==4.67.1
traitlets==5.14.3
trimesh==4.7.4
typing_extensions==4.15.0
urllib3==2.5.0
vtk==9.5.1
wcwidth==0.2.13
webcolors==24.11.1
xarray==2023.1.0
yarl==1.20.1
zope.event==5.1.1
zope.interface==7.2
zstandard==0.24.0
/opt/envs/ccf
asttokens==3.0.0
brainglobe-atlasapi @ git+https://github.com/AllenNeuralDynamics/brainglobe-atlasapi.git@2b3fed883c20184bdf921e294450c8a4054049c1
brainglobe_space==1.0.2
certifi==2024.7.4
charset-normalizer==3.3.2
click==8.1.7
comm==0.2.3
contourpy==1.3.2
cycler==0.12.1
debugpy==1.8.16
decorator==5.2.1
exceptiongroup==1.3.0
executing==2.2.0
fonttools==4.59.2
idna==3.7
ipykernel==6.29.5
ipython==8.37.0
jedi==0.19.2
joblib==1.5.2
jupyter_client==8.6.3
jupyter_core==5.8.1
kiwisolver==1.4.9
markdown-it-py==3.0.0
matplotlib==3.9.1
matplotlib-inline==0.1.7
mdurl==0.1.2
meshio==5.3.5
nest-asyncio==1.6.0
numpy==2.0.1
packaging==25.0
pandas==2.2.2
parso==0.8.5
pexpect==4.9.0
pillow==11.3.0
platformdirs==4.4.0
prompt_toolkit==3.0.52
psutil==7.0.0
ptyprocess==0.7.0
pure_eval==0.2.3
pyarrow==17.0.0
Pygments==2.18.0
pyparsing==3.2.3
python-dateutil==2.9.0.post0
pytz==2024.1
pyzmq==27.0.2
requests==2.32.3
rich==13.7.1
scikit-learn==1.5.1
scipy==1.14.0
six==1.16.0
stack-data==0.6.3
threadpoolctl==3.6.0
tifffile==2024.7.24
tornado==6.5.2
traitlets==5.14.3
treelib==1.7.0
typing_extensions==4.15.0
tzdata==2024.1
urllib3==2.2.2
wcwidth==0.2.13
/opt/envs/ctlut
aiobotocore==2.13.1
aiohappyeyeballs==2.3.5
aiohttp==3.10.1
aioitertools==0.11.0
aiosignal==1.3.1
annotated-types==0.7.0
arrow==1.3.0
asciitree==0.3.3
asttokens==2.4.1
async-timeout==4.0.3
attrs==23.2.0
backports.tarfile==1.2.0
bidsschematools==0.7.2
blessed==1.20.0
botocore==1.34.131
bqplot==0.12.43
certifi==2024.7.4
cffi==1.17.0
charset-normalizer==3.3.2
ci-info==0.3.0
click==8.1.7
click-didyoumean==0.3.1
comm==0.2.2
contourpy==1.2.1
cryptography==43.0.0
cycler==0.12.1
dandi==0.62.4
dandischema==0.10.2
debugpy==1.8.2
decorator==5.1.1
dnspython==2.6.1
email_validator==2.2.0
etelemetry==0.3.1
exceptiongroup==1.2.2
executing==2.0.1
fasteners==0.19
fonttools==4.53.1
fqdn==1.5.1
frozenlist==1.4.1
fscacher==0.4.1
fsspec==2024.6.1
gast==0.4.0
h5py==3.11.0
hdmf==3.14.2
hdmf_zarr==0.8.0
humanize==4.10.0
idna==3.7
imageio==2.34.2
importlib-metadata==4.13.0
interleave==0.2.1
ipydatagrid==1.3.2
ipydatawidgets==4.3.2
ipyfilechooser==0.6.0
ipykernel==6.29.5
ipympl==0.9.4
ipython==8.26.0
ipython-genutils==0.2.0
ipyvolume==0.6.3
ipyvue==1.11.1
ipyvuetify==1.10.0
ipywebrtc==0.6.0
ipywidgets==8.1.3
isodate==0.6.1
isoduration==20.11.0
jaraco.classes==3.4.0
jaraco.context==5.3.0
jaraco.functools==4.0.2
jedi==0.19.1
jeepney==0.8.0
jmespath==1.0.1
joblib==1.4.2
jsonpointer==3.0.0
jsonschema==4.23.0
jsonschema-specifications==2023.12.1
jupyter_client==8.6.2
jupyter_core==5.7.2
jupyterlab_widgets==3.0.11
keyring==25.3.0
keyrings.alt==5.0.1
kiwisolver==1.4.5
lazy_loader==0.4
matplotlib==3.9.1
matplotlib-inline==0.1.7
more-itertools==10.4.0
multidict==6.0.5
natsort==8.4.0
ndx-grayscalevolume==0.0.2
ndx-icephys-meta==0.1.0
ndx-spectrum==0.2.2
nest-asyncio==1.6.0
networkx==3.3
numcodecs==0.13.0
numpy==1.26.4
nwbinspector==0.4.37
nwbwidgets==0.11.3
packaging==24.1
pandas==2.2.2
parso==0.8.4
patsy==0.5.6
pexpect==4.9.0
pillow==10.4.0
platformdirs==4.2.2
plotly==5.13.1
prompt_toolkit==3.0.47
psutil==6.0.0
ptyprocess==0.7.0
pure_eval==0.2.3
py2vega==0.6.1
pycparser==2.22
pycryptodomex==3.20.0
pydantic==2.8.2
pydantic_core==2.20.1
Pygments==2.18.0
pynwb==2.8.1
pyout==0.7.3
pyparsing==3.1.2
python-dateutil==2.9.0.post0
pythreejs==2.4.2
pytz==2024.1
PyYAML==6.0.2
pyzmq==26.0.3
referencing==0.35.1
requests==2.32.3
rfc3339-validator==0.1.4
rfc3987==1.3.8
rpds-py==0.19.1
ruamel.yaml==0.18.6
ruamel.yaml.clib==0.2.8
s3fs==2024.6.1
scikit-image==0.24.0
scipy==1.14.0
SecretStorage==3.3.3
semantic-version==2.10.0
six==1.16.0
stack-data==0.6.3
statsmodels==0.14.2
tenacity==9.0.0
threadpoolctl==3.5.0
tifffile==2024.7.24
tornado==6.4.1
tqdm==4.66.5
traitlets==5.14.3
traittypes==0.2.1
trimesh==4.4.4
types-python-dateutil==2.9.0.20240316
typing_extensions==4.12.2
tzdata==2024.1
uri-template==1.3.0
urllib3==2.2.2
wcwidth==0.2.13
webcolors==24.6.0
widgetsnbextension==4.0.11
wrapt==1.16.0
yarl==1.9.4
zarr==2.18.2
zarr-checksum==0.4.2
zipp==3.19.2